Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme63629g00001 CTGCTTTTTGATGTCGACAAGGCAACTGACATAAAGATTCCTACAATTGAATCAGGAAAAGTGATTTTAAAAGAAAGACTTCAACATAAAAGGGTACTTCTTGTACTTGATGATGTTAATAAATTGGAGCAGCTAAAGGCTTTGTGCGGAAGTCGTGAATGGTTTGGTACAGGTAGCAAAATAATAATCACAACAAGGGATAGACATCTACTCAAGGAGCATGGAGCTGACTGTATATATAGAGTGAAAGAACTGGACGAAAGTGAATCACTCGAGGTTTTGAACCGGGGTGCGTTCAATCAGGGTACAATTACTCCTGAAGATTTTGTTGAACTTTCCAAAGAGGTAGTTGCCTATTCTGGGGGATTACCTCTTGCTCTTCAAAATCTTCGGTCTGTTTTGCATGGAAAAGAAGCACGTCAGTGGAAGGATCTGTTGAGAATTGAGAAACAGATTCTCAGATCTGACACAGAGCCTAGCTCCTCTAGAAAGTACAACTTCCTAGCCCTAGAATAA 516 0.4012 MLFDVDKATDIKIPTIESGKVILKERLQHKRVLLVLDDVNKLEQLKALCGSREWFGTGSKIIITTRDRHLLKEHGADCIYRVKELDESESLEVLNRGAFNQGTITPEDFVELSKEVVAYSGGLPLALQNLRSVLHGKEARQWKDLLRIEKQILRSDTEPSSSRKYNFLALE 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme63629g00001 171 PRINTS Disease resistance protein signature 120 134 - -
Trme63629g00001 171 PRINTS Disease resistance protein signature 26 40 - -
Trme63629g00001 171 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 168 IPR027417 -
Trme63629g00001 171 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 156 IPR044974 GO:0006952
Trme63629g00001 171 Pfam NB-ARC domain 18 154 IPR002182 GO:0043531
Trme63629g00001 171 Gene3D - 1 79 IPR027417 -
Trme63629g00001 171 Gene3D - 84 169 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme63629g00001 Trme-Chr63629 3 627 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme63629g00001 11 145 WRKY Transcription Factor Family AT4G12020 39.259 8.45e-21 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme63629g00001 - - mtr:112421270 252.292