Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme63622g00001 AGTGCTTCAGACATGGTCCTGGCTGATGACAACTTTGCCTCAATCGTTGCGGCCGTGGCAGAGGGAAGGGCTATATACAATAACACAAAGCAGTTTATTAGATACATGATTTCTTCCAACATTGGTGAAGTAGTATGTATATTTGTGGCTGCAGTGCTTGGAATACCTGATACCCTGGCCCCTGTTCAGTTGCTTTGGGTCAATTTGGTTACTGATGGATTGCCTGCCACTGCTATTGGCTTCAATAAGCAAGACTCTGATGTGATGAAGGTTAAGCCTCGAAAGGTACGCTACTAA 297 0.4478 SASDMVLADDNFASIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVQLLWVNLVTDGLPATAIGFNKQDSDVMKVKPRKVRY 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme63622g00001 98 FunFam Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 9 98 - -
Trme63622g00001 98 Pfam Cation transporting ATPase, C-terminus 57 96 IPR006068 -
Trme63622g00001 98 PANTHER CALCIUM-TRANSPORTING ATPASE 1 96 - -
Trme63622g00001 98 SUPERFAMILY Calcium ATPase, transmembrane domain M 22 96 IPR023298 -
Trme63622g00001 98 Gene3D - 2 17 IPR023214 -
Trme63622g00001 98 Gene3D - 18 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme63622g00001 Trme-Chr63622 53 843 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme63622g00001 1 96 Primary Pumps ATPases(2) AT1G10130 98.958 8.43e-60 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme63622g00001 K05853 - thj:104816765 187.193