Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme63603g00001 ATGGACAAGTACGAGGCTGTTAAGGATTTGGGTTCTGGCAATTTTGGTGTTGCTAGGCTTATGAGGAACAAAGTTACAAAGGAACTTGTCGCCATGAAATACATCGAACGTGGTCACAAGATTGATGAGAACGTTGCAAGGGAGATCATGAATCATAG 158 0.4241 MDKYEAVKDLGSGNFGVARLMRNKVTKELVAMKYIERGHKIDENVAREIMNH 52
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme63603g00001 52 Gene3D Phosphorylase Kinase; domain 1 1 52 - -
Trme63603g00001 52 ProSiteProfiles Protein kinase domain profile. 4 52 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme63603g00001 52 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Trme63603g00001 52 SUPERFAMILY Protein kinase-like (PK-like) 1 49 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme63603g00001 Trme-Chr63603 338 829 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme63603g00001 1 45 Core Cell Cycle Gene Families AT3G48750 46.667 1.93e-06 40.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme63603g00001 K14498 - gmx:547811 102.064