Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme6359g00002 ATGGATGACAATTCAGCTAACAATGGAACCAATGAAGTTGTTTTGAACATAAACAATGATGTCCCTAACATTAGTGAAGACTCAAGCTCCTATGCCATCGCTTCTTTCTTGCAAAAGTTGGTGGCTGAGGTGGTAGGTACATATTTCTTGATATTTGCCGGTTGTGCTGCTGTCGCGGTGAACAAGAACAACGATAATGTTGTGACGCTTCCCGGAATCTCAATTGTTTGGGGACTTGCTGTCATGGTGTTAGTTTACTCTCTTGGTCATATCTCTGGTGCTCATTTCAATCCTGCAGTTACCATTGCTTTTGCCACCACTAGAAGGTTTCCCTTAAAACAG 342 0.424 MDDNSANNGTNEVVLNINNDVPNISEDSSSYAIASFLQKLVAEVVGTYFLIFAGCAAVAVNKNNDNVVTLPGISIVWGLAVMVLVYSLGHISGAHFNPAVTIAFATTRRFPLKQ 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme6359g00002 114 ProSitePatterns MIP family signature. 95 103 IPR022357 -
Trme6359g00002 114 PRINTS Major intrinsic protein family signature 38 57 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme6359g00002 114 PRINTS Major intrinsic protein family signature 77 101 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme6359g00002 114 PANTHER AQUAPORIN NIP2-1 28 114 IPR034294 -
Trme6359g00002 114 Gene3D Glycerol uptake facilitator protein. 2 114 IPR023271 -
Trme6359g00002 114 Pfam Major intrinsic protein 34 113 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme6359g00002 114 SUPERFAMILY Aquaporin-like 36 113 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme6359g00002 Trme-Chr6359 1380 1953 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme6359g00002 22 114 Major Intrinsic Protein MIP AT4G18910 75.269 2.89e-45 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme6359g00002 K09874 - gmx:100794883 179.104