Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme63574g00001 ATGGTTGCGGATGAGCATTTTGTCATCCACATTCCTGATAACTTACCTCTTGATGTTGCCGGTCCTCTCCTCTGCGCCGGTGTCACAGTATATAGCCCTCTTAAATATTTTGGACTCGACAAGCCCGGACTTCATATAGGTGTTGTTGGTCTTGGAGGACTTGGCCACATGGCTGTGAAATTTGCCAAAGCTTTTGGTGCTCATGTCACGGTAATTAGTACATCGCCTAACAAAGAAAACGAAGCATTAGAACACTTAGGAGCTGACTCGTTTATAATAAGTCGCGACCAGAATCAAATGCAGGCTGCAATGGGTACTTTAGATGGTATTATTGACACAGTTTCAGCTGGTCATGCTCTTTTACCAATGATTGGTTTATTGAAAACTAATGGAAAACTTGTAATGCTTGGTGTTATAGTAAAGCCTCTTGAGCTTCCTGAATATGCTTTACTTGCAGGGAGGAAATTAATTGCCGGGAGTACGGTTGGAGGGATTAAGGAGACTCAAGAAATGATTGATTTTGCTGCCAAACA 533 0.424 MVADEHFVIHIPDNLPLDVAGPLLCAGVTVYSPLKYFGLDKPGLHIGVVGLGGLGHMAVKFAKAFGAHVTVISTSPNKENEALEHLGADSFIISRDQNQMQAAMGTLDGIIDTVSAGHALLPMIGLLKTNGKLVMLGVIVKPLELPEYALLAGRKLIAGSTVGGIKETQEMIDFAAK 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme63574g00001 177 FunFam Cinnamyl alcohol dehydrogenase 26 177 - -
Trme63574g00001 177 Pfam Zinc-binding dehydrogenase 53 176 IPR013149 -
Trme63574g00001 177 PANTHER ALDEHYDE REDUCTASE 1 177 IPR047109 GO:0016616
Trme63574g00001 177 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 15 176 IPR036291 -
Trme63574g00001 177 Gene3D - 26 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme63574g00001 Trme-Chr63574 1 728 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme63574g00001 1 177 Monolignol Biosynthesis Gene Families AT4G37990 69.492 2.19e-68 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme63574g00001 K23232 - gmx:100816901 279.256