Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme635607g00001 CCTTATATTGGAGGTGCAAGTTCAAGTTCAACCCCTGCATGGGACTTCACTACTTCTAACTACCCTGGTGCAAGATATGCCGGAGACCGTACCCCTAGAGGACGCGACTCTGCATCCGTCTGTGATGTAGTGTTAGAGGATGAGGATGAACCTAAGGAATGGATGGCACAGGTTGAGCCAGGGGTTCATATTACTTTTGTTTCTCTTCCTAATGGTGGAAATGATCTCAAGAGAATTCGTTTCAG 245 0.4694 PYIGGASSSSTPAWDFTTSNYPGARYAGDRTPRGRDSASVCDVVLEDEDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRF 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme635607g00001 81 ProSiteProfiles BRX domain profile. 52 81 IPR013591 -
Trme635607g00001 81 PANTHER PROTEIN BREVIS RADIX-LIKE 1 6 81 IPR044532 -
Trme635607g00001 81 MobiDBLite consensus disorder prediction 1 18 - -
Trme635607g00001 81 MobiDBLite consensus disorder prediction 1 36 - -
Trme635607g00001 81 Pfam Transcription factor regulating root and shoot growth via Pin3 52 81 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme635607g00001 Trme-Chr635607 14 258 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme635607g00001 1 81 Major Intrinsic Protein MIP AT1G31880 63.218 7.48e-27 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme635607g00001 - - gmx:100785003 160.229