Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme63465g00001 AATGAAAGGCCTCCACTGCCTGCAAGTTGTCAACCAGCACTTGCGCATCTAATAAAGCGTTGTTGGTCGGCAAATCCTTCAAAGAGGCCAGATTTCAGTGATATTGTGTCTACTCTTGAGAGGTATGATGAATGTGTAAAGGAAGGTCTTCCTCTAACTCATCATTCAGGACTAGTCACCAAAAACTTCATTATCGAACGCTTAAAAGGCTGCGTCTCCATGAGTTCCTCCATACCTGTAAATGCTTAA 249 0.4297 NERPPLPASCQPALAHLIKRCWSANPSKRPDFSDIVSTLERYDECVKEGLPLTHHSGLVTKNFIIERLKGCVSMSSSIPVNA 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme63465g00001 82 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 42 - -
Trme63465g00001 82 Gene3D Transferase(Phosphotransferase) domain 1 1 59 - -
Trme63465g00001 82 Pfam Protein tyrosine and serine/threonine kinase 2 39 IPR001245 GO:0004672|GO:0006468
Trme63465g00001 82 SUPERFAMILY Protein kinase-like (PK-like) 2 56 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme63465g00001 Trme-Chr63465 123 371 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme63465g00001 1 82 MAP Kinase Kinase Kinase AT1G62400 73.034 1.39e-37 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Trme63465g00001 PK_Tyr_Ser-Thr 6.3e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme63465g00001 - - aprc:113845847 162.925