Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme63340g00001 TTTGCTCCTTTCTGTCACTGTGAAAAGAAAGTAGGAGATTACCTCTACCCTCAATTTTATGATAAGTCATGTCCTAATGTTGAAGAGATTGTCAAGTCCGTAGTTGCGAAGGCTGTCGCTAAAGAGCCTCGCATGGCTGCTTCCTTGCTGAGACTACATTTCCATGACTGTTTCGTTAAGTTGAAGCGCGGTTGTAGTCACGTCAAAAACCTTAACGCTGCAGCCGCAATTGCGGGTTGCGATGCATCGGTGTTGCTAGATAGCAGCGGAACTATCATCAGTGAGAAGAGGTCAAATCCGAACCGAAATTCAGCTAGAGGATTTGAAGTCATTGAAGAAATTAAGTCTGCAATAGAGAAAGAGTGTCCTAATACAGTCTCTTGTGCTGACATTTTGACTCTAGCTGCT 408 0.4387 FAPFCHCEKKVGDYLYPQFYDKSCPNVEEIVKSVVAKAVAKEPRMAASLLRLHFHDCFVKLKRGCSHVKNLNAAAAIAGCDASVLLDSSGTIISEKRSNPNRNSARGFEVIEEIKSAIEKECPNTVSCADILTLAA 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme63340g00001 136 ProSiteProfiles Plant heme peroxidase family profile. 14 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme63340g00001 136 PANTHER PEROXIDASE 72-RELATED 14 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme63340g00001 136 PRINTS Plant peroxidase signature 48 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme63340g00001 136 PRINTS Plant peroxidase signature 24 43 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme63340g00001 136 PRINTS Plant peroxidase signature 106 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme63340g00001 136 PRINTS Plant peroxidase signature 125 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme63340g00001 136 SUPERFAMILY Heme-dependent peroxidases 15 136 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme63340g00001 136 Pfam Peroxidase 31 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme63340g00001 136 Gene3D - 15 136 - -
Trme63340g00001 136 ProSitePatterns Peroxidases active site signature. 46 57 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme63340g00001 Trme-Chr63340 249 863 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme63340g00001 1 136 Peroxidase AT5G66390 67.391 5.57e-61 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme63340g00001 K00430 - gmx:100788562 199.904