Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme6326g00001 ATGTATATGGGAGATACAGAGAGTTGTTGTAATAGCAAAGTAGTTTTTGGTTCTGAATGGAATCAAAATGGAAAGGAGAAGCAGAAAATTGAAGTTTACATCAAAGTTCTTAATCGACTTAGGGAATTGAATGTCCATGAGGCTATGGTTTCTGGCTTTGAGGATGATCTTTGGGCGCACTTCCATCGCCTTCCCACTAGGTATGCTTTAGATATGAATGTGGAGAGGGCCCAATATGTTCTCATGCATAAAAGGTTACTGCATATCGCACGAACCTCAGCTACAGCAACTGGACCTGCACTTGAAGTCCGTCTTGTACAGGTGGTTCGTTCTGCTTCTGGAGTGAGTACTTGTAGTAATTCCCTTCATTCAAACTCACAAAGTGAAGTTAGTCCTCAAGATTCTGATATTCATGGCAAAATGATGAGGCACATGCATGAAATTACAATTTCAACAAATGACAAACCAAAACTTCTTAGTCAGTTGACTTCATTACTGTCTGAGACTGGGCTGGACATTCAAGAAGCACATGCTTTTTCGACATCGGATGGCTATTCGTTGGATGTTTTCGTTGTTGGTGGTTGGGCAGTTGAG 594 0.4125 MYMGDTESCCNSKVVFGSEWNQNGKEKQKIEVYIKVLNRLRELNVHEAMVSGFEDDLWAHFHRLPTRYALDMNVERAQYVLMHKRLLHIARTSATATGPALEVRLVQVVRSASGVSTCSNSLHSNSQSEVSPQDSDIHGKMMRHMHEITISTNDKPKLLSQLTSLLSETGLDIQEAHAFSTSDGYSLDVFVVGGWAVE 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme6326g00001 198 ProSiteProfiles ACT domain profile. 147 198 IPR002912 -
Trme6326g00001 198 PANTHER BIFUNCTIONAL URIDYLYLTRANSFERASE/URIDYLYL-REMOVING ENZYME 115 196 IPR010043 GO:0006807|GO:0008773
Trme6326g00001 198 SUPERFAMILY ACT-like 141 193 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme6326g00001 Trme-Chr6326 70 1322 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme6326g00001 1 198 MAP Kinase Kinase Kinase AT4G38470 49.138 1.71e-58 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme6326g00001 - - gmx:100818047 244.588