Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme63213g00001 AAGCCAAACAATGTCCTTCTTGATGATGACATGGTTGCTCATGTGAGTGATTTTGGAATAGAAAGACTTGTCTTAGCCATTGGCGGCAGCTCTCAGAAGGATACTAGTACAATTGGAATAAAAGGGACTTTAGGTTATGCTCCTCCAGAGTACGGAATGGGTTCTGAAGTTTCTAGATGTGGTGACATGTATAGCTTTGGAATTCTGGTGTTGGAAATGCTTACTGGTAGAAGACCTACTGATGAAGTTTTTGATGATGGTCAAAATCTGCATAACTTTGTTGCAATATCATTTCCTGACAACCTTATGAAGATTTTAGACCCACATCTTGTATCAAGAGATGTAGAAGTAGCAATACAAGATGNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNAAAGAAAGAATGAATATTGCAGATGTCACTGGAGAGCTTAGCAAAATCAAAAAGGCCTTTTTCAACGGTAGATAA 525 0.32 KPNNVLLDDDMVAHVSDFGIERLVLAIGGSSQKDTSTIGIKGTLGYAPPEYGMGSEVSRCGDMYSFGILVLEMLTGRRPTDEVFDDGQNLHNFVAISFPDNLMKILDPHLVSRDVEVAIQDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKERMNIADVTGELSKIKKAFFNGR 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme63213g00001 174 SUPERFAMILY Protein kinase-like (PK-like) 1 96 IPR011009 -
Trme63213g00001 174 Gene3D Transferase(Phosphotransferase) domain 1 1 168 - -
Trme63213g00001 174 Coils Coil 119 121 - -
Trme63213g00001 174 Coils Coil 151 153 - -
Trme63213g00001 174 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 116 - -
Trme63213g00001 174 ProSiteProfiles Protein kinase domain profile. 1 171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme63213g00001 174 Pfam Protein kinase domain 1 92 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme63213g00001 Trme-Chr63213 3 641 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme63213g00001 1 120 Receptor kinase-like Gene Family AT3G47580 47.107 4.15e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Trme63213g00001 Pkinase 4.1e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme63213g00001 - - vvo:131635889 212.231