Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme631851g00001 AGGTCAGTGAGAATCAAGAGGAGCAAGGATGTGGTTAAGTTCAAGGTCAGATGTTCCAAGTACCTTTACACACTCTGTGTGTTTGACGTTGAGAAAGCCGACAAATTGAAGCAATCACTTCCTCCAGGTCTGTAA 135 0.437 RSVRIKRSKDVVKFKVRCSKYLYTLCVFDVEKADKLKQSLPPGL 44
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme631851g00001 44 PANTHER 60S RIBOSOMAL PROTEIN L38 1 44 IPR002675 GO:0003735|GO:0005840|GO:0006412
Trme631851g00001 44 Gene3D - 1 44 IPR038464 -
Trme631851g00001 44 Pfam Ribosomal L38e protein family 1 44 IPR002675 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme631851g00001 1 44 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 90.909 1.47e-24 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme631851g00001 K02923 - vvi:100268138 88.5817