Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme63150g00001 ATGTTAGAAGAGAAAGACGAAGACACACATGAAGATTTTGAGCTTCCTATCTTTGATCGAGCTACAATATTGAAGGCAACAAAAAACTTTTCTTTTGATAACAAGCTCGGTGAAGGTGGTTTCGGAACAGTATACAAGGGTACATTGCTTAATGGACAAGAAATTGCTGTCAAAAGGCTTTTAATGAGTTCAAGTCAAGGATCAAAGGAGTTTAAAAATGAAGTTATGTTATGTGCTAAACTTCAACACCGGAATCTTGTTAAGGTTGTCGGTTTTTGTATTGAAGGAGATGAGAAAATGTTGATCTATGAATACATGTCCAACAAAAGTCTTGATTCATTTCTTTTTGGTGAGTAA 357 0.3473 MLEEKDEDTHEDFELPIFDRATILKATKNFSFDNKLGEGGFGTVYKGTLLNGQEIAVKRLLMSSSQGSKEFKNEVMLCAKLQHRNLVKVVGFCIEGDEKMLIYEYMSNKSLDSFLFGE 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme63150g00001 118 ProSitePatterns Protein kinases ATP-binding region signature. 36 58 IPR017441 GO:0005524
Trme63150g00001 118 Pfam Protein tyrosine and serine/threonine kinase 31 115 IPR001245 GO:0004672|GO:0006468
Trme63150g00001 118 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 105 - -
Trme63150g00001 118 ProSiteProfiles Protein kinase domain profile. 30 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme63150g00001 118 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 7 116 - -
Trme63150g00001 118 Gene3D Phosphorylase Kinase; domain 1 2 105 - -
Trme63150g00001 118 SUPERFAMILY Protein kinase-like (PK-like) 10 117 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme63150g00001 Trme-Chr63150 34 485 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme63150g00001 18 118 Receptor kinase-like Gene Family AT4G04510 62.376 2.22e-40 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trme63150g00001 PK_Tyr_Ser-Thr 1.7e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme63150g00001 - - tpra:123915292 199.519