Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme63134g00001 GCTCAAAAAGTATTTGGGAACAGATGGACAGAAATAGCAAAGGTGGTTTCAGGCAGAACGGATAATGCTGTGAAAAATCGATTCTCCACACTCCGCAAGAAGAGAGAAAANNNNNNNNNNANNNNAAAAGAGAACATCATTCCATACATTGATTCAAATAGCAAGAGGAATATTTCTCATCAAGGTTATAATACAAATGCAATGTCAGAATCTGCTATGCCAGTTAAAAAAATGAGGAGGGCCCATATTCCTCATGGTGCAAACAAGGTCAACTTTGGAGACAGATCACATTTGCGAAATGCAGTTTCAACAAATCAGCAGCCAAGGGCACCATTTGCGGAATTAGATAAAAAATCCAATTGTGTAAAGAATCTTCCTGACAGGCATCATGTTTTCAATGACGAGTTCAACAGTTCCGGTACTTGTCTCAAATGGAACTTGAATCTTTCATTATGA 456 0.3706 AQKVFGNRWTEIAKVVSGRTDNAVKNRFSTLRKKREXXXXXXKENIIPYIDSNSKRNISHQGYNTNAMSESAMPVKKMRRAHIPHGANKVNFGDRSHLRNAVSTNQQPRAPFAELDKKSNCVKNLPDRHHVFNDEFNSSGTCLKWNLNLSL 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme63134g00001 151 CDD SANT 1 31 IPR001005 -
Trme63134g00001 151 Gene3D - 1 79 - -
Trme63134g00001 151 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 36 IPR017930 -
Trme63134g00001 151 PANTHER MYB PROTEIN-RELATED 1 78 - -
Trme63134g00001 151 Pfam Myb-like DNA-binding domain 5 31 IPR001005 -
Trme63134g00001 151 SUPERFAMILY Homeodomain-like 3 36 IPR009057 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme63134g00001 1 113 MYB Transcription Factor Family AT2G02820 53.913 6.03e-32 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Trme63134g00001 Myb_DNA-binding 1.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme63134g00001 K09422 - gmx:100793723 154.451