Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme63089g00001 ATGGCGGCCGCTCCCACTCCTCGGGAAGAGAACGTTTACATGGCTAAGCTAGCCGAACAAGCCGAACGCTACGAAGAAATGGTGGAATTCATGGAGAAAGTTTCCGCCAACGCCGATAACGAAGAACTCACGGTGGAGGAAAGGAACCTTCTCTCGGTGGCTTATAAGAATGTCATCGGAGCTCGCCGTGCCTCGTGGCGTATCATTTCATCGATCGAGCAGAAAGAAGAGAGCCGCGGCAACGAGGATCACGTCACCGTCATCCGTGACTACCGATCTAAGATCGA 287 0.5331 MAAAPTPREENVYMAKLAEQAERYEEMVEFMEKVSANADNEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVTVIRDYRSKI 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme63089g00001 95 Coils Coil 14 41 - -
Trme63089g00001 95 SMART 1433_4 8 95 IPR023410 -
Trme63089g00001 95 Gene3D - 1 95 IPR036815 -
Trme63089g00001 95 SUPERFAMILY 14-3-3 protein 8 95 IPR036815 -
Trme63089g00001 95 Pfam 14-3-3 protein 14 95 IPR023410 -
Trme63089g00001 95 PRINTS 14-3-3 protein zeta signature 91 95 IPR000308 -
Trme63089g00001 95 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Trme63089g00001 95 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Trme63089g00001 95 PANTHER 14-3-3 PROTEIN 8 95 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme63089g00001 Trme-Chr63089 1 287 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme63089g00001 6 95 14-3-3 family AT1G78300 88.889 9.60e-52 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme63089g00001 K06630 - gmx:100792014 180.259