Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme63046g00001 GTGATAGAGCAGAGTCAAGTTGCACCACCACTCGGGTTACTTCCATCACCAACCACACTCCCCCTCACCGTGTGTGACACTCCATGGTTTTACTGCCAATACCCCATTAAACGAATATTCTTCTACCACTTCCCTCATCCAACTCATTACTTCCTTCAAACAACACTTCCTATTCTCAAACACTCTCTTTCCTTAACCCTCCAACACTTCTTCCCCTTCTCCTCCAACCTTGTTATCCCTTCAGATTCCCAAACTGCCCCTTACATACGTTACCTCAGCAGCACCAACGCTCTCTCTTTCACCGTAGCTGAATCCGCAGCAGACTTCAACCTCCTCATTTCTGATTCACAAGATGCTCAAAACTGGCACCCTCTTGTTCCAGATTTGTCTTCGTCAAGTACTGAACAGAACAGCACACGAGTCATTCCAATAATGGCCATACAAGTCACCGTTATGCCAAACTCTGGTTTATCTATCTGTCTCGCGTTCAAACATGTGGCTGCAGACGGAAAATCACTTCACCATTTCATGAAATTTTGGCCTCTGTTTCAAAAAACAGAGCAAACAACAAAAACAATTCGTCTTTTGAACACTCTCTCTGCCTCTTGA 609 0.4483 VIEQSQVAPPLGLLPSPTTLPLTVCDTPWFYCQYPIKRIFFYHFPHPTHYFLQTTLPILKHSLSLTLQHFFPFSSNLVIPSDSQTAPYIRYLSSTNALSFTVAESAADFNLLISDSQDAQNWHPLVPDLSSSSTEQNSTRVIPIMAIQVTVMPNSGLSICLAFKHVAADGKSLHHFMKFWPLFQKTEQTTKTIRLLNTLSAS 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme63046g00001 202 Gene3D - 1 198 IPR023213 -
Trme63046g00001 202 PANTHER - 1 187 - -
Trme63046g00001 202 Pfam Transferase family 18 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme63046g00001 Trme-Chr63046 205 813 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme63046g00001 39 180 Monolignol Biosynthesis Gene Families AT5G48930 25.517 1.30e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme63046g00001 - - tpra:123894645 296.204