Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme62982g00001 ATGGCGAGAGGATTGAAGGTGCTATCAGCCCTTGACTCAGCAAAAACACAATATTACCATTTCAAAGCCATCATGATAGCAGGAATGGGACTTTTCTCAGACTCCTATGATCTCTTTTCCATAACTCTCATCACAAAGATGCTAGGAAGAATATACTACTCCGATAGCGACGAAATCCATAAAGTCAACCCTATCGTTGTCTCGGCCCTCGTCTCCGTTGCACTCCTAGGAACCGCAATCGGTCAACTCGTATTCGGCCGTCTTGGAGACCTAAAAGGTCGGCGCCACGTCTACGGTATCGCCTTATTGTTGATGATAACAAGTTCTTTGGCTTCTGGCTTCTCCATTTGTACAACAAAGAGAGCTTGTGTTTTCCTCTCACTTGCTTTCTTTAGATTCTTCTTAGGACTTGGAATTGGTGGTGACTATCCTTTATCTTCTACCATTATGTCTGAGTTTGCTAATAAAAGGACAAGAGGGTCTTTTATAGCTGCTGTTTTTTCTATGCAAGGGTTTGGTATATTGGCTAGTGCTACGGTTACTATGGTGATTTGCTCCATATTTCGCCGCGCTTCGAAGCCGGCTTCGGCTTACGATGTGCCGCCGGAGGCCGATGTTGCATGGAGGTTGATACTAATGATTGGTTCTGTTCCGGCTGCTTTGACTTACTATTGGCGTATGATGATGCCAGAAACTGCCAGGTAG 705 0.4511 MARGLKVLSALDSAKTQYYHFKAIMIAGMGLFSDSYDLFSITLITKMLGRIYYSDSDEIHKVNPIVVSALVSVALLGTAIGQLVFGRLGDLKGRRHVYGIALLLMITSSLASGFSICTTKRACVFLSLAFFRFFLGLGIGGDYPLSSTIMSEFANKRTRGSFIAAVFSMQGFGILASATVTMVICSIFRRASKPASAYDVPPEADVAWRLILMIGSVPAALTYYWRMMMPETAR 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme62982g00001 234 Gene3D MFS general substrate transporter like domains 19 234 IPR036259 -
Trme62982g00001 234 SUPERFAMILY MFS general substrate transporter 11 233 IPR036259 -
Trme62982g00001 234 ProSitePatterns Sugar transport proteins signature 2. 134 159 IPR005829 GO:0016020|GO:0022857|GO:0055085
Trme62982g00001 234 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 234 IPR020846 GO:0022857
Trme62982g00001 234 Pfam Sugar (and other) transporter 25 234 IPR005828 GO:0016020|GO:0022857|GO:0055085
Trme62982g00001 234 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 21 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme62982g00001 Trme-Chr62982 100 804 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme62982g00001 5 234 Inorganic Solute Cotransporters AT1G20860 64.530 8.28e-103 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme62982g00001 K08176 - gmx:100803834 332.798