Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme62939g00001 ATGGAAATGATGACCTATGAGACGAGTGATCAACACAAGCGTGTAAGGGATGCAAAAAACAAGTCATCAAATGGGAGAGAACTTTCAAGGGTGTTTTCTGAAGATTATGATGCAGAAGAGATTTTAATATTAGATCCTAGAGGACCTAGAGTAAATTTATGGAACAAAATATTCTTAGCAGCTTGTTTGATTTCATTGTTTGTGGATCCACTTTTCTTTTACTTACCAGTTGTTAAGAAAGAAAAATGCATTGATATGTCACTTGGTCTTGAAGTTTCACTTACAATAATTAGGACATTGGTTGATGCATTTTACATTATTCAGATTTATGTTAGGTTTCAAACTGCTTATATTGCTCCTTCGTCTCGTGTTTCTGGTAGAGGAGAACTTATTATAGATTCATCAAAGATTGCTTCAAATTATATGAGTAGAGACTTTTGGTTTGATCTTGTTGCTGCTCTACCACTTCCTCAGGTATATTCCTGA 486 0.3436 MEMMTYETSDQHKRVRDAKNKSSNGRELSRVFSEDYDAEEILILDPRGPRVNLWNKIFLAACLISLFVDPLFFYLPVVKKEKCIDMSLGLEVSLTIIRTLVDAFYIIQIYVRFQTAYIAPSSRVSGRGELIIDSSKIASNYMSRDFWFDLVAALPLPQVYS 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme62939g00001 161 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 16 159 - -
Trme62939g00001 161 SUPERFAMILY Voltage-gated potassium channels 45 160 - -
Trme62939g00001 161 MobiDBLite consensus disorder prediction 1 22 - -
Trme62939g00001 161 Pfam Ion transport protein 53 160 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme62939g00001 Trme-Chr62939 32 517 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme62939g00001 18 159 Ion Channels AT2G28260 63.380 3.95e-57 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme62939g00001 K05391 - gmx:100804375 252.292