Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme629157g00001 ATGAGCGTGGTTATTCCAAGGAACACTGCCATACCTGTCAAAATGACAAAAAAATATGTTACCCGTCAAGATAACCAACGCGAAGTCACATTTACTGTTTTCGAGGGCGAGAGAGCAAGAGCAGACGACAACAATAAGCTTGATTCGTTTATCCTCTCTTGCCGTCCGGATGCTCCTCGTGGCGCACCTTTGGA 194 0.4639 MSVVIPRNTAIPVKMTKKYVTRQDNQREVTFTVFEGERARADDNNKLDSFILSCRPDAPRGAPL 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme629157g00001 64 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 1 63 IPR029047 -
Trme629157g00001 64 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 1 64 IPR029047 -
Trme629157g00001 64 PANTHER HEAT SHOCK PROTEIN 70KDA 1 63 IPR013126 GO:0005524|GO:0140662
Trme629157g00001 64 Pfam Hsp70 protein 2 63 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme629157g00001 Trme-Chr629157 1 194 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme629157g00001 1 63 Calmodulin-binding Proteins AT3G12580 55.556 1.87e-16 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme629157g00001 K03283 - lja:Lj0g3v0151879.1 83.1889