Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme6289g00001 ATGGACTTGAGCAACTCCAAAAATCTCAAGGTGACTCCACGCTTTGAAATGATACAAAATCTTGAGCGACTAGATCTTACAGGATGCATAAGCTTGTTGGAGGTGCATCCATCAATTGGACATCTTACAGAACTTGCATTCTTGAGTTTGCAAAACTGTACTAGTCTAGTCACTCTTGATTTTGGCAATGCACGAAGACTAAGGTCTTTGAGAGTTCTTCGTCTTGCTGGCTGTACAAAACTTGAAAACACTCCAGATTTCAGTGGAACATTAATTCTTCAGTACCTTGATATGGCGATGCACAAGTTTATCCACGATTCATGA 324 0.4012 MDLSNSKNLKVTPRFEMIQNLERLDLTGCISLLEVHPSIGHLTELAFLSLQNCTSLVTLDFGNARRLRSLRVLRLAGCTKLENTPDFSGTLILQYLDMAMHKFIHDS 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme6289g00001 107 SUPERFAMILY L domain-like 2 100 - -
Trme6289g00001 107 Gene3D Ribonuclease Inhibitor 1 102 IPR032675 -
Trme6289g00001 107 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 2 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme6289g00001 Trme-Chr6289 372 695 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme6289g00001 1 107 WRKY Transcription Factor Family AT4G12020 40.187 5.33e-10 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme6289g00001 - - vvo:131609373 155.221