Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme62760g00001 AAAGGAACTTTTGGGTATCTTGATCCTGATTACTTTAGAACACAACATCTTACAGAAAAATCGGATGTTTATTCTTTTGGAGTGGTTCTACTTGAAGTGTTGTGTGCAAGACCAGCCATCGATCTGTCTTGTCCAAGTGAGCAAGTCAATTTGGCTGAGTGGGGATTGCTCTGCAAAGAAAAAGGTATACTTGAAGAGATCGTTGATCCTTCCATCACAAGACAAATTAATCAAAACTCACTTAGAATATTTAKTGAGACYGTGGAAAAATGCTTACAGGATTATGGTTGTGATAGGCCAACAATGGTTGATGTGTTGTGGGACTTGGAATATGCTTTGCAACTTCAGATAGAACCACATGACGATAGCAGCGCATTTGTATCACTTCAATTGCCTAATGTTCAACATTTACCTTGTATGTCTACACTAATTGAAGTGGATGGCATGTCTATTGGGAGGGTTGATGAATCTGAAACTACAACGTCGATGATGCTAGATAGAATTTCATGTGAAGCTAATCAAGGCACAACGATCAACACGCAAGTGTCTCCACTGGAGAGTTATTTTTTTAGATAG 576 0.3872 KGTFGYLDPDYFRTQHLTEKSDVYSFGVVLLEVLCARPAIDLSCPSEQVNLAEWGLLCKEKGILEEIVDPSITRQINQNSLRIFXETVEKCLQDYGCDRPTMVDVLWDLEYALQLQIEPHDDSSAFVSLQLPNVQHLPCMSTLIEVDGMSIGRVDESETTTSMMLDRISCEANQGTTINTQVSPLESYFFR 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme62760g00001 191 Pfam Protein tyrosine and serine/threonine kinase 6 105 IPR001245 GO:0004672|GO:0006468
Trme62760g00001 191 ProSiteProfiles Protein kinase domain profile. 1 112 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme62760g00001 191 SUPERFAMILY Protein kinase-like (PK-like) 2 110 IPR011009 -
Trme62760g00001 191 Gene3D Transferase(Phosphotransferase) domain 1 1 116 - -
Trme62760g00001 191 PANTHER OS07G0166700 PROTEIN 1 116 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme62760g00001 Trme-Chr62760 2 577 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme62760g00001 1 157 Receptor kinase-like Gene Family AT3G46290 55.556 1.58e-53 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Trme62760g00001 PK_Tyr_Ser-Thr 1.3e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme62760g00001 - - cam:101496146 235.728