Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme62604g00001 AGAGACAGCTTCATAACCCACAGAGCATTCTGTGATGCATTAGCTGAAGAAAACAACAAAGCAAACGAAGGATCAATACAATTATCAAACTTACAACATCAACAAATCCCAAATCTTGTTTCTTCATTATTACCAATAAACCCTCCACAAATTGGTGGAACTTCATCAGAAATATTCAACACTGATCACAAGCATCCATTATCATCACCTCATGATCTCATGTCAGTGCCAGCAAAACAATTCAACAACAACATATTCACTAGAAGTCTTTCATCATCAACTTCATCTCCTTCTCTTCAACTCAGTTCAAATAATTCACTCAACAATATCTTGGAAGAAAATGGGTCATTGCATTTATCTGCTGCTACTTCACCTCATATGTCAGCTACTGCATTGCTTCAAAAAGCTGCTCAAATGGGTGCAACTGTGAGTAATAGTAATGCCGGTATGAGTATGCCGGAAAAAACCATTGCTGCAAACATGATGGCGCCGCCNNNNNNNNNNANNNNGCAACAACAAGGACATGCTTTCATGAATCACTACATGCAACAGCAGCAGCAACAACAAGCTCAGTATAATAATAGTAATAATTTCAATGCAAATGGGATGATTAATGGAGGTGTTAATGGATCAATGAATGGAGTTGATATGTTTAATGCTATATTGGATCAAA 673 0.3655 RDSFITHRAFCDALAEENNKANEGSIQLSNLQHQQIPNLVSSLLPINPPQIGGTSSEIFNTDHKHPLSSPHDLMSVPAKQFNNNIFTRSLSSSTSSPSLQLSSNNSLNNILEENGSLHLSAATSPHMSATALLQKAAQMGATVSNSNAGMSMPEKTIAANMMAPPXXXXXQQQGHAFMNHYMQQQQQQQAQYNNSNNFNANGMINGGVNGSMNGVDMFNAILDQ 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme62604g00001 224 Coils Coil 14 34 - -
Trme62604g00001 224 MobiDBLite consensus disorder prediction 53 72 - -
Trme62604g00001 224 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 1 188 IPR031140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme62604g00001 Trme-Chr62604 128 800 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme62604g00001 1 144 IDZ Gene Family AT3G50700 33.333 1.03e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme62604g00001 - - gmx:100785295 187.578