Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme625926g00001 GGTCCATTTGATCCATTAGGTCTAGCAAATGATCCAGACCAAGCTGCAATTCTAAAAGTGAAGGAAATCAAGAATGGTAGACTTGCTATGTTTTCCATGCTTGGTTTCTTCATTCAAGCTTATGTCACAGGAGAAGGTCCTGTTGAGAATTTTGCAAAACATCTCAGTGACCCTTTTGGCAACAACTTGCTTACTGTTATTGCTGGAAATGTTGAGAGGGCTCCAACTCTGTGA 234 0.4103 GPFDPLGLANDPDQAAILKVKEIKNGRLAMFSMLGFFIQAYVTGEGPVENFAKHLSDPFGNNLLTVIAGNVERAPTL 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme625926g00001 77 Gene3D Chlorophyll a/b binding protein domain 1 77 - -
Trme625926g00001 77 SUPERFAMILY Chlorophyll a-b binding protein 2 68 - -
Trme625926g00001 77 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 67 IPR001344 GO:0009765|GO:0016020
Trme625926g00001 77 Pfam Chlorophyll A-B binding protein 3 41 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme625926g00001 Trme-Chr625926 1 234 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme625926g00001 1 77 Chloroplast and Mitochondria Gene Families AT4G10340 89.610 5.06e-45 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme625926g00001 K08916 - cave:132180280 150.599