Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme62517g00001 ACAACAACAACAACCACGGCTAGTGCTAGTGTTTCAACACCGGAGACCACAGGATGTATTGGTGGAGACGCATCCACTGGAAGATGGCCTAGACAAGAAACTCTTACTCTTCTTGAGATCAGATCTCGTCTTGACCCTAAATTTAAAGAAGCTAATCAAAAGGGTCCTTTATGGGATGAAGTCTCTAG 188 0.4415 TTTTTTASASVSTPETTGCIGGDASTGRWPRQETLTLLEIRSRLDPKFKEANQKGPLWDEVS 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme62517g00001 62 Gene3D - 29 62 - -
Trme62517g00001 62 MobiDBLite consensus disorder prediction 1 31 - -
Trme62517g00001 62 MobiDBLite consensus disorder prediction 1 20 - -
Trme62517g00001 62 PANTHER FI21293P1 15 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme62517g00001 Trme-Chr62517 1 188 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme62517g00001 2 62 Trihelix Transcription Factor Family AT3G10000 61.194 1.50e-21 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Trme62517g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme62517g00001 - - vvo:131644681 115.546