Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme62443g00001 ATGTCTTTATTTTTTAGGTGCTTCTTGGGTGCTGAGCTACTTAAATCTAATAATGAGGGGAACGAATCTTTACTCAAGTCCTTGTGGCATCACTCCGATGCAATACTGTGCTGCACTCTAAAGGCAACTCCCGTGTTCACTTTCGCAAACCAGGCAGGGCTTGACATGCTGGAGACTACCTTAGTTGCTCTACAGGATATAGCATTGGAGAAAATATTTGATGACCATGGCCGAAAGATTCTGTGCTCGGAGTTTCCTCAAATTATACAACAGGGTTTTGCATGTCTTCAAAGTGGTCTTTGTCTCTCAAGCATGGGGAGACCTATTTCATATGAAAGAGTAGTGGCTTGGAAGGTGCTGAATGAAGAAGAGAATGCTCATTGTATTAGCTTTATGTTTGTGAACTGGTCTTTTGTTTGA 420 0.419 MSLFFRCFLGAELLKSNNEGNESLLKSLWHHSDAILCCTLKATPVFTFANQAGLDMLETTLVALQDIALEKIFDDHGRKILCSEFPQIIQQGFACLQSGLCLSSMGRPISYERVVAWKVLNEEENAHCISFMFVNWSFV 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme62443g00001 139 Pfam MEKHLA domain 5 138 IPR013978 -
Trme62443g00001 139 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 5 139 IPR044830 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme62443g00001 Trme-Chr62443 20 736 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme62443g00001 1 139 Homeobox Transcription Factor Family AT4G32880 65.248 2.07e-62 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme62443g00001 K09338 - gmx:100819365 262.692