Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme6237g00001 ATGACGGTAGTTTCCCGTTTGTCAAAATTACATCCCAAGGATACAGATGCTCCTACAGATGGAGTTGATGATATGACAAAGCTCGCTTATTTGCATGAGCCAGGAGTGCTCTACAATTTGGAAACTCGATACAAGATCAATGAAATATATACTTATACCGGAAATATTCTTATTGCGATCAATCCCTTTCAAAATCTTCCACACCTGTATGATGCTAGTGCAATGAAAAGATACAAGGGAGAAAAAGTGGGAAATTTAAGCCCACATGTTTTTGCTATTGCTGAAGCAGCATATAGGGCTATGATTAATGAGGCGAAGAGCAACTCTATTCTGGTTAGTGGTGAAAGTGGTGCCGGTAAGACAGAAACAACGAAAATGCTTATGCTTTACTTAGCATATTTGGGTGGTCACACTGCATCTGAAGGACGGACTGTTGAACAACAAGTTCTAGAAGTAAGAAGGTTATCTAACTCTGGATTATGGTTGCTACTGCTTCTACATGTTTGGTTGTGGCTCATCCCAAGGCCTATTGTTTTTACCTGCATGCTTGCTCTTGGCCAAA 562 0.4039 MTVVSRLSKLHPKDTDAPTDGVDDMTKLAYLHEPGVLYNLETRYKINEIYTYTGNILIAINPFQNLPHLYDASAMKRYKGEKVGNLSPHVFAIAEAAYRAMINEAKSNSILVSGESGAGKTETTKMLMLYLAYLGGHTASEGRTVEQQVLEVRRLSNSGLWLLLLLHVWLWLIPRPIVFTCMLALGQ 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme6237g00001 187 Pfam Myosin head (motor domain) 22 151 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme6237g00001 187 PANTHER MYOSIN 12 153 - -
Trme6237g00001 187 SMART MYSc_2a 14 185 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme6237g00001 187 Gene3D Kinesin motor domain 3 158 IPR036961 -
Trme6237g00001 187 PRINTS Myosin heavy chain signature 50 69 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme6237g00001 187 PRINTS Myosin heavy chain signature 107 132 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme6237g00001 187 ProSiteProfiles Myosin motor domain profile. 20 187 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme6237g00001 187 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 151 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme6237g00001 Trme-Chr6237 355 1417 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme6237g00001 3 151 Myosins gene family AT1G08730 77.181 7.63e-77 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme6237g00001 K10357 - gmx:100803485 259.61