Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme623581g00001 ATGATTCAGACAGGAATATCTACAATTGATGTCATGAATTCTATTGCTAGAGGTCAAAAGATCCCTCTATTCTCAGCTGCCGGTCTCCCTCATAATGAAATTGCTGCACAGATATGTCGTCAGGCGGGCTTAGTCAAGCGATT 143 0.4266 MIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKR 47
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme623581g00001 47 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 43 IPR027417 -
Trme623581g00001 47 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 1 47 IPR022879 -
Trme623581g00001 47 Gene3D - 1 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme623581g00001 Trme-Chr623581 1 143 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme623581g00001 1 47 Primary Pumps ATPases(2) AT1G76030 100.000 1.97e-27 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme623581g00001 K02147 - ming:122070997 94.3597