Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme623523g00001 CTCTCTGGAGGTCAAAAGCAAAGAGTTGCAATTGCAACAGCAATTCTGAAAGATCCAAGAATCCTTCTTCTTGATGAAGCTACAAGTGCGCTTGATGCGGAGTTGTGTTGTGAATCCGAAGAAACCACATCAATAATCCTTAGTGTGTGGAGCAAATGA 159 0.4214 LSGGQKQRVAIATAILKDPRILLLDEATSALDAELCCESEETTSIILSVWSK 52
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme623523g00001 52 Gene3D - 1 34 IPR027417 -
Trme623523g00001 52 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 34 IPR039421 -
Trme623523g00001 52 Pfam ABC transporter 1 29 IPR003439 GO:0005524
Trme623523g00001 52 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 36 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme623523g00001 Trme-Chr623523 90 248 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme623523g00001 1 34 Calmodulin-binding Proteins AT2G36910 82.353 6.18e-13 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme623523g00001 K05658 - csin:114307742 65.4698