Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme6219g00001 GTGAATGCCTTCAGGGAGAGGAGAGCACTTGCTTTGACATTGAATGACACCAAAACAGCAGTGAACAAACTTCATCGAATGCTCAATTTTTTAGTTGCCATTATCATACTGATGGTTGTAGAAGAAATGAACATATTGACTACCGTATTTCTTAGATTTGATAATCTGAAGATAACGATACCTAACGCTGTTCTTGCTACTAAGGCCATAAATAATTTTTACCGTAGTCCTGACATGGGAGATGCTGTTGAATTCCTTATCCATATAGCTACCCCAGCTGAAAAGATTGCACTCATAAAACACAGAATAAATAGTTTCGTTGATAACAAGAAGGAGCACTGGTATCCTTCACCTTTTATAGTCTTGAAGGATCACGAACAATTGAACATGGTGAGAATGGCGATCTGGCCAACTCATAGAATGAACTTCCAAGACATGGGAGAAAGATTTATCAGGCGGTCTCTTCTTATTGAAGAGTTGATAAAGATTTTCAAAGATCTCGACATTCAATACCGTCTCATGCCTCTTGACATTAACGTTAGAGCTGTGCCTACCACTTCTGATCGTCTTCCACCTAGTTGGACATCATTCACAAATTGA 600 0.3883 VNAFRERRALALTLNDTKTAVNKLHRMLNFLVAIIILMVVEEMNILTTVFLRFDNLKITIPNAVLATKAINNFYRSPDMGDAVEFLIHIATPAEKIALIKHRINSFVDNKKEHWYPSPFIVLKDHEQLNMVRMAIWPTHRMNFQDMGERFIRRSLLIEELIKIFKDLDIQYRLMPLDINVRAVPTTSDRLPPSWTSFTN 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme6219g00001 199 Gene3D - 36 73 IPR023408 -
Trme6219g00001 199 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 1 39 IPR016688 -
Trme6219g00001 199 Pfam Mechanosensitive ion channel 40 169 IPR006685 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme6219g00001 Trme-Chr6219 502 1483 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme6219g00001 1 27 Mechanosensitive Ion Channel Family AT1G78610 92.593 1.93e-09 54.7