Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme6202g00001 ATGGGAGCTGCAGATTCAACTGATGGTTCCCTTCGCAAAGATCATGCCCATGTTTTAAATACAGTGTTAAGAAGGAGTGAGAAGGCTCTAATACACAATTACAAACACGGATTTTCGGGCTTTGCAGTCCGTTTATCGAAAAGTGAAGCAAATTCAATTGCTCGGCAACCTGGAGTTGTGTCTGTGTTCCCTGATCCCATTCTAAAGCTCCATACAACACATTCTTGGGATTTTCTCAAGTTGCAAACTCAAGTTAAAATTGACAAAACCCTCTCCAATTCTTCTTCCTCTTCATCAAACATTGTGATTGGCATGTTAGACTCAGGTATATGGCCAGAAGCGGAAAGTTTTTCAGATGATGGAATGAATCCTATTCCACCTAGTTGGAAAGGCATTTGCATGACATCAAATGACTTCAACTCATCAAATTGTAACAGGTAA 441 0.4014 MGAADSTDGSLRKDHAHVLNTVLRRSEKALIHNYKHGFSGFAVRLSKSEANSIARQPGVVSVFPDPILKLHTTHSWDFLKLQTQVKIDKTLSNSSSSSSNIVIGMLDSGIWPEAESFSDDGMNPIPPSWKGICMTSNDFNSSNCNR 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme6202g00001 146 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 71 IPR037045 -
Trme6202g00001 146 Pfam Peptidase inhibitor I9 10 71 IPR010259 -
Trme6202g00001 146 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 26 146 IPR045051 -
Trme6202g00001 146 SUPERFAMILY Subtilisin-like 28 139 IPR036852 GO:0004252|GO:0006508
Trme6202g00001 146 Gene3D Peptidase S8/S53 domain 72 146 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme6202g00001 Trme-Chr6202 383 1209 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme6202g00001 18 146 Subtilisin-like Serine Gene Family AT1G20160 60.000 1.14e-53 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme6202g00001 K25898 - lja:Lj0g3v0345599.1 224.172