Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme62011g00001 ATGCCGACTCCACTTCGAGCATTTAGGAGTCCTCTAGGAGAGGACGAGGATCTCAATGACAATGATGATTTTAGTAACACAAGAAATGCAGCATCGCGTTCGAGCCGGGTCAAACCGAAGAAGACCAAGATATATAGTGATTTTCATGTTGATTTGAGTGGTTTAGTTGGTATAAACCCGGCACACAGAGACGATGGTAACCGTGAAGTGGTTAATATTGTACTCATGACATTTGATGCACTAAGAAGAAGGCTAAGCCAACTTGTAGATGCCAAGGAATTGAGCACGGGTTTGGTCAAGCGTGCGGATTTAAAAGTTGGCAATATTTGTATGACCAAAGGAATTCGAACAAACGTGACGAAGAGGGTCGGAGCAGTGCCTGGAGTTGAGATTGGGGACATTTTCTTTTTCCGAATGGAATTGTGTATTGTTGGTTTGCATGCTCAGTCCATGGGGGGAATTGATGCCTTGCATATCACAGGTGTCCGCGAGGAAGAAACTTTGGCTGTAAGCATTGTTTCTTCGGGAGAATATGATGATGAAGCTGAGGATGGTGATGTTATAATTTATACCGGTCAGGGTGGGAATTTCAACAAGAAAGATAAGCATGTGTCAGATCAGAAGCTTCATAGGGGCAATCTTGCTTTGGATAGAAGTTCGCGAACACACAATGAAATAAGAGTCATCCGAGGCATCAAAGATGCTGTGAATCCGAACTCAAAAATCTACGTCTATGATGGTCTATATAAAATTCAAGATTCATGGGTTGAAAAAGCCAAAGG 782 0.4271 MPTPLRAFRSPLGEDEDLNDNDDFSNTRNAASRSSRVKPKKTKIYSDFHVDLSGLVGINPAHRDDGNREVVNIVLMTFDALRRRLSQLVDAKELSTGLVKRADLKVGNICMTKGIRTNVTKRVGAVPGVEIGDIFFFRMELCIVGLHAQSMGGIDALHITGVREEETLAVSIVSSGEYDDEAEDGDVIIYTGQGGNFNKKDKHVSDQKLHRGNLALDRSSRTHNEIRVIRGIKDAVNPNSKIYVYDGLYKIQDSWVEKAKG 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme62011g00001 261 ProSiteProfiles YDG domain profile. 124 261 IPR003105 -
Trme62011g00001 261 Gene3D - 106 261 IPR036987 -
Trme62011g00001 261 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 25 260 - -
Trme62011g00001 261 SMART G9a_1 119 261 IPR003105 -
Trme62011g00001 261 MobiDBLite consensus disorder prediction 1 38 - -
Trme62011g00001 261 Pfam SAD/SRA domain 123 260 IPR003105 -
Trme62011g00001 261 SUPERFAMILY PUA domain-like 106 260 IPR015947 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme62011g00001 Trme-Chr62011 1 782 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme62011g00001 3 260 Su(var)3-9 homologs AT5G04940 56.705 5.56e-88 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme62011g00001 K24405 - gmx:100812173 350.903