Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme61975g00001 AAGTACAAAAGGGAGAAGGAAGATGTGCAGTTATCAACAATATTTGGTTTTTCAACCATATCTAATGCCACAAATCACTTTTCAGACGATAACAAGTTAGGACAAGGTGGTTTTGGACCGGTATACAAGGGCATATTGGACGATGGACTAGAGATTGCAGTCAAGAGGCTATCAGAAACTTCTGCACATGGAGAAGAACAATTCAAAAATGAAGTCATGTTGATGGCAAAGCTTCAACACCGCAATCTTGTAAAACTTCTTGGTTGTTCAATTCATCAAGAGGAAAGGCTTTTGATCTATGAATTCATGCCCAACAGAAGCTTGGATTATTTCATTTTTGGTTTGAAACTTAACACTATGTAA 363 0.3719 KYKREKEDVQLSTIFGFSTISNATNHFSDDNKLGQGGFGPVYKGILDDGLEIAVKRLSETSAHGEEQFKNEVMLMAKLQHRNLVKLLGCSIHQEERLLIYEFMPNRSLDYFIFGLKLNTM 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme61975g00001 120 ProSiteProfiles Protein kinase domain profile. 27 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme61975g00001 120 Gene3D Phosphorylase Kinase; domain 1 1 102 - -
Trme61975g00001 120 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 102 - -
Trme61975g00001 120 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 6 114 - -
Trme61975g00001 120 Pfam Protein tyrosine and serine/threonine kinase 30 112 IPR001245 GO:0004672|GO:0006468
Trme61975g00001 120 SUPERFAMILY Protein kinase-like (PK-like) 10 116 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme61975g00001 Trme-Chr61975 180 697 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme61975g00001 5 120 Receptor kinase-like Gene Family AT3G45860 55.932 6.66e-41 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trme61975g00001 PK_Tyr_Ser-Thr 8.4e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme61975g00001 - - tpra:123913214 227.639