Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme61972g00001 GATGGTAATGGTTCAGGGAATCCTTATCAGCATGAAGGAACTGAAGTGGAGACAGGAGAAGAGGATGAAGAAGAGGAGCATCGCGGATTTGAGCTTTTGAGCTTGCTTACTGGTTGTGTTGATGCTATTGGATCAAGGAATGTTGCTGCAATCAACCATTTCATTGCAAAATTGGGYGATCTTGCATCTCCAAGAGGAACYTCSATAAGCCGAATTTGTGCTTATTATACAGAAGCCTTAGCCATCAGAGTCACCAGGCTTTGGCCTCATGTTTTTCAAATCACCGCCACTACTCGCGATTTCGATAGGGTGGTTGATGACGATGAAATGATCACTGCATTGAGGCTTCTTAACCAGGTTACCCCAATTCCGAAGTTTCTTCATTTCACATCAAATGAGATGCTGTTGAGGGCTTTTGAAGGGAAAGAAAGGGTTCACATTATAGACTTTGACATAAAGCAAGGACTTCAATGGCCTAGCTTGTTCCAAAGTTTAGCTTCAAGGACTAATCCTCCAAGCCATGTTCGAATCACGGGCGTGGGGGAATCGAAGCAAGAGTTGAATGAAACCGGAGACAGACTAGCAGGGTTTGCTGAGGCTTTGAACCTTCCCTTTGAGTTCCATCCTGTGGTGGACAGACTTGAAGATGTGAGGCTTTGGATGCTTCATGTGAAGGAACATGAAACTGTGGCTGTGAACTGTGTTATGCAGCTACATAAGATCCTTTATGATGGTAGTGGAGGAGCATTGAGGGACTTTTTAGGTCTCATTCGCAGCACAAATCCTACAATGGTGGTTATGGCAGAACAAGAAGCGGAACACAACGAGGCGAGGTTGGATTCAAGAGTGTGCAATTCGTTGAAATATTAC 870 0.4437 DGNGSGNPYQHEGTEVETGEEDEEEEHRGFELLSLLTGCVDAIGSRNVAAINHFIAKLGDLASPRGTSISRICAYYTEALAIRVTRLWPHVFQITATTRDFDRVVDDDEMITALRLLNQVTPIPKFLHFTSNEMLLRAFEGKERVHIIDFDIKQGLQWPSLFQSLASRTNPPSHVRITGVGESKQELNETGDRLAGFAEALNLPFEFHPVVDRLEDVRLWMLHVKEHETVAVNCVMQLHKILYDGSGGALRDFLGLIRSTNPTMVVMAEQEAEHNEARLDSRVCNSLKYY 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme61972g00001 290 ProSiteProfiles GRAS family profile. 23 290 IPR005202 -
Trme61972g00001 290 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 31 290 IPR005202 -
Trme61972g00001 290 Pfam GRAS domain family 33 290 IPR005202 -
Trme61972g00001 290 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme61972g00001 Trme-Chr61972 2 871 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme61972g00001 3 290 GRAS Transcription Factor Family AT1G63100 73.898 5.01e-154 443
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trme61972g00001 GRAS 2.1e-88 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme61972g00001 - - gmx:100786173 478.404