Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme61959g00001 ATGTTACTTCAAATATATTGCAGACAAATTGCCTTCTTCACTGGTCCTACAGTTGGAGGACTTCTTAATGCAACATGTGGGAATATTACTGAGCTGATAATAGCAATATTTGCTCTTAGCAACAACCAAATTGCTGTGGTCAAGTATTCTCTTTTAGGCTCCATCCTTTCAAACCTTCTTCTTGTTCTTGGAACCTCTCTTCTTTGTGGTGGCATTGCAAACCTTGGAGTCGAGCAAAAATATGACAGA 249 0.3896 MLLQIYCRQIAFFTGPTVGGLLNATCGNITELIIAIFALSNNQIAVVKYSLLGSILSNLLLVLGTSLLCGGIANLGVEQKYDR 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme61959g00001 83 Pfam Sodium/calcium exchanger protein 13 74 IPR004837 GO:0016020|GO:0055085
Trme61959g00001 83 Gene3D - 16 83 IPR044880 -
Trme61959g00001 83 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 8 83 IPR004713 GO:0006812|GO:0008324|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme61959g00001 Trme-Chr61959 121 476 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme61959g00001 8 83 Antiporters AT2G38170 80.263 7.20e-37 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme61959g00001 K07300 - gmx:100779440 119.012