Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme6189g00001 ATGATCCCTTCACCAAATGAGAGTATCCCAATGTTTTCTCCCGCGTACTATGCTGCGTGCAGTGCCGGCGGTGTCTTCAGCTGTGGTCTTACTCACATGGCTGTCACTCCTCTTGATCTCGTCAAGTGCAACATGCAGATTGACCCTAAAAAGTATAAGAGCATCACTTCAGGATTTGGAGTTTTACTGAAGGAGCAGGGTGCTAGAGGTTTCTTCAAAGGCTGGGTGCCAACTTTGCTTGGTTACAGTGCTCAAGGAGCATGCAAGTTTGGATTCTATGAATTCTTCAAAAAGTATTACTCAGATCTTGCAGGACCAGAGAATGCAGTCAAGTACAAAACTTTCATATATCTAGCTGGTTCTGCTTCAGCTGAAGTTATTGCTGATGTTGCACTTTGTCCTATGGAGGCGGTAAAAGTTCGTGTTCAAACTCAGCCCGGCTATGCTCGTGGTTTGTCTGATGGGTTACCTAAATTTATCAAGGCTGATGGTGTTTCTGGGTTGTATAAAGGACTTGTTCCTCTTTGGGGCCGTCAGATACCATACACGATGATGAAATTTGCTTCATTTGAGACTATTGTGGAGATGATCTACAAAAATGTCATTCCAACCCCCAAAGCACAATGCAGCAAAAGTAAGCAACTTGGAGTCAGTTTTGCAGCAGGATATATTGCAGGTGTACTGTGCGCAATTGTCTCACACCCTGCTGATAACCTTGTTTCTTTTCTCAACAATGCTAAGGGAGCCACTGTTGGTGAT 759 0.4414 MIPSPNESIPMFSPAYYAACSAGGVFSCGLTHMAVTPLDLVKCNMQIDPKKYKSITSGFGVLLKEQGARGFFKGWVPTLLGYSAQGACKFGFYEFFKKYYSDLAGPENAVKYKTFIYLAGSASAEVIADVALCPMEAVKVRVQTQPGYARGLSDGLPKFIKADGVSGLYKGLVPLWGRQIPYTMMKFASFETIVEMIYKNVIPTPKAQCSKSKQLGVSFAAGYIAGVLCAIVSHPADNLVSFLNNAKGATVGD 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme6189g00001 253 ProSiteProfiles Solute carrier (Solcar) repeat profile. 15 99 IPR018108 -
Trme6189g00001 253 Pfam Mitochondrial carrier protein 18 101 IPR018108 -
Trme6189g00001 253 Pfam Mitochondrial carrier protein 114 200 IPR018108 -
Trme6189g00001 253 ProSiteProfiles Solute carrier (Solcar) repeat profile. 112 196 IPR018108 -
Trme6189g00001 253 FunFam Phosphate carrier protein, mitochondrial 109 253 - -
Trme6189g00001 253 SUPERFAMILY Mitochondrial carrier 16 247 IPR023395 -
Trme6189g00001 253 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 7 252 IPR044677 GO:0005315|GO:1990547
Trme6189g00001 253 FunFam Phosphate carrier protein, mitochondrial 2 106 - -
Trme6189g00001 253 Gene3D Mitochondrial carrier domain 16 251 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme6189g00001 Trme-Chr6189 29 1848 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme6189g00001 1 253 Chloroplast and Mitochondria Gene Families AT5G14040 81.250 1.41e-156 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme6189g00001 K15102 - gmx:100791467 476.092