Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme618835g00001 TCAGATACACGTCGAGTTCCTTACAATCTTCAACAAGGAACTTCTATGTCCTGTCCTCATGTTGCTGGCATTGCTGGTCTTCTCAAGACACTTCATCCTAATTGGAGTCCTGCAGCTATCAAATCAGCCATCATGACTACCGGTATGTTAGCAAATCAATATCTTAATATCCATACATGA 180 0.4111 SDTRRVPYNLQQGTSMSCPHVAGIAGLLKTLHPNWSPAAIKSAIMTTGMLANQYLNIHT 59
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme618835g00001 59 Pfam Subtilase family 2 48 IPR000209 GO:0006508|GO:0008236
Trme618835g00001 59 ProSitePatterns Serine proteases, subtilase family, serine active site. 13 23 IPR023828 -
Trme618835g00001 59 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 6 49 IPR045051 -
Trme618835g00001 59 SUPERFAMILY Subtilisin-like 6 50 IPR036852 GO:0004252|GO:0006508
Trme618835g00001 59 Gene3D Peptidase S8/S53 domain 3 49 IPR036852 GO:0004252|GO:0006508
Trme618835g00001 59 ProSiteProfiles Serine proteases, subtilase domain profile. 1 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme618835g00001 Trme-Chr618835 1 180 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme618835g00001 1 53 Subtilisin-like Serine Gene Family AT5G59810 67.925 8.20e-22 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme618835g00001 - - gmx:100794135 91.6633