Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme61882g00001 ATGAGCCCTGGATGGACATTAGGATGGACATGGGGGAAGAAAGAAATCATATGGGCCATGATGGGAGCACAAGCTACAGAACAAGGAGACTGTGCAAAGTTCAAGTTAAAGATTCCTCATAGTTGCAAAAGAAGTCCTCAAGTTGTTGATTTATTACCCGGAGCTTCGTTCAATATGCAATACACAAACTGTTGCAAAGGTGGTGTGTTAACCTCTTGGGGACAAGATCCTTCAGGTGCAATCGCGGCATTTCAGATGGGTGTAGGACTCTCTGGAAGAACTAACAAGACGGTGAAACTCCCTCAGGATTTTAAATTGCTTGGACCGGGAGCCGGATATTCGTGTGGCCCTGCTAAGAGAGTTCCTTCAACTGTTATTCTTACAGATGACCGTAGGCGAAAAGCTCAAGCTTTGA 415 0.453 MSPGWTLGWTWGKKEIIWAMMGAQATEQGDCAKFKLKIPHSCKRSPQVVDLLPGASFNMQYTNCCKGGVLTSWGQDPSGAIAAFQMGVGLSGRTNKTVKLPQDFKLLGPGAGYSCGPAKRVPSTVILTDDRRRKAQAL 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme61882g00001 138 PANTHER PROTEIN COBRA 1 138 IPR006918 GO:0010215|GO:0016020
Trme61882g00001 138 Pfam COBRA-like protein 2 138 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme61882g00001 Trme-Chr61882 61 475 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme61882g00001 2 138 COBRA Gene Family AT5G15630 69.343 5.52e-72 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme61882g00001 - - gmx:100813134 262.307