Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme61881g00001 GTGACAGTGCTCGTAGTGCACTCAGCAGCATGCTTTTACTATTGGCTAGCTTTTCAATACAAAATACCTGTAGAAACTTGGATCGGACATCATCAAGAGAATTTTAAAGAGAAAGGTGTCTGGGTAGGCTACACCTATTCAATGTACTGGTCAATTGTGACACTTACAACAGTTGGCTATGGAGACTTGTACTCAAAGAATACAGGAGAAAAAACTTTCAACATATTCTATATGCTATTCAACATGGGCCTCACAGCATATATAATTGGAAACATGACGAATCTCATAGTTCATGGTGCTGTTAGAACATCTATCATGAGGGATGCCATCAATGAAATATTACAATATGCAAGCAAAAATCGCCTTCCTGAAGGTTTGAAAGAGCAAATGCTCACACATGTGCAGCTCAAGTACAGGACAGCAGAATTACAACAAGAAAAAGTTCTTGAAGATCTTCCTAAGGCGATCAGATCTAGCATTGCTCAACATCTTTTCCGAAAAACTTTGGAAGACACCTACCTTTTCAGAAATCATCTTGCAAAATGA 546 0.3846 VTVLVVHSAACFYYWLAFQYKIPVETWIGHHQENFKEKGVWVGYTYSMYWSIVTLTTVGYGDLYSKNTGEKTFNIFYMLFNMGLTAYIIGNMTNLIVHGAVRTSIMRDAINEILQYASKNRLPEGLKEQMLTHVQLKYRTAELQQEKVLEDLPKAIRSSIAQHLFRKTLEDTYLFRNHLAK 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme61881g00001 181 Pfam Ion transport protein 3 102 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Trme61881g00001 181 Gene3D Helix hairpin bin 101 164 - -
Trme61881g00001 181 PANTHER POTASSIUM CHANNEL AKT1 1 176 IPR045319 GO:0005249|GO:0006813
Trme61881g00001 181 Gene3D - 1 98 - -
Trme61881g00001 181 SUPERFAMILY Voltage-gated potassium channels 2 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme61881g00001 Trme-Chr61881 80 811 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme61881g00001 1 176 Ion Channels AT4G32650 67.614 1.22e-87 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme61881g00001 K21867 - dcr:108207538 339.347