Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme6179g00001 ATGGTTAAGGTTTTAGCTTCTTCTTTTCATGTGAGTACATATTTTGATAGAATTCAAGAGTCACTGTTTAATCAATTCGTAATCGAAACACTTTCGGGGCCACCTTTGGTGGAAATTCGAAAGGCTGAAGAGGAAGAGGAAAGACTTGCTGAAGAGGTTCAAAAGTTGCAGAATGCTGGGGTTACCATACCTGCTGATCTTAGAGATTCTGCATTTCCTACCAAGAGTGGAAGGTCGAAGAGTGGAATGCTTCCGAAAAGCCCTGTTGTTAAAAGTGCCAGGTTTTCAAGGCCACTTTCGAAGAAATCTGATGATGGAATTGGGAATGGTGGTGGGATAACTATTGATCACTTACATAAGCTGAATCCAAATAATGTGTCTGCTTGGAATATGAAAAGGTTGATGAATATGGTTCGGAACGGAGCACTTACTACATTGGATGAACAAATACTTGATTCCAGTGTTGATGATGAGCATGCCACACAAATCAGAAGTGAAAATGAGGCTAAAGCAGCTGCTAAGAAAATCTTCCAGAATGTTGCTAGGCGCGGCTGCAGGTTTATATACCCTGAGGACTTGATGCGTTTTATGCGAGAAGATGAAGCTATAAAAACCATAAATCTCTTTGAAGGAGCGGTAGATACCGGGAGAATCAGTAAATCCGCCTTGAAAAATTGGGTG 681 0.4112 MVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLVEIRKAEEEEERLAEEVQKLQNAGVTIPADLRDSAFPTKSGRSKSGMLPKSPVVKSARFSRPLSKKSDDGIGNGGGITIDHLHKLNPNNVSAWNMKRLMNMVRNGALTTLDEQILDSSVDDEHATQIRSENEAKAAAKKIFQNVARRGCRFIYPEDLMRFMREDEAIKTINLFEGAVDTGRISKSALKNWV 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme6179g00001 227 Coils Coil 36 62 - -
Trme6179g00001 227 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 1 227 IPR016688 -
Trme6179g00001 227 MobiDBLite consensus disorder prediction 68 87 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme6179g00001 1 227 Mechanosensitive Ion Channel Family AT2G17010 60.526 1.23e-84 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme6179g00001 K22048 - gmx:100789882 352.058