Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme61726g00001 ATGTTTGGTGCAGGTACAGATACTACCCTTGCAGTCTTAGAATGGACAATGACAGAACTTTTAAGGCACCCAAATGTGATGCAAAAACTACAAAATGAGATAAGAAATGTGGTTAGCCAAAAAACTCACATAACTGAGCAAGATTTGAACAACATGCATTACTTGAAAGCAGTAATTAAAGAAACTCTTAGACTACACCCACCATCACCATTATTAATTCCTAGGGAATCAAGGCAAGACACAAAAATTATGGGCTATGACATTGCAGCTGGAACACAAGTAATAGTTAATGCATTTGCAATTTCAACAGATTCTTCTTATTGGGATCAACCTCTAGAATTTCAACCTGAGAGATTCCTGAAAAATGTAGATATTAAAGGACATGATTTTCAATTAATACCATTTGGAGCTGGAAGGAGGGGTTGTCCTGGAATAAGTTTTGCTATGGTTGTGAATGAGTTGGTTTTAGCTAATCTTGTTCATCAATTTGATTGGTCATTGCCTAATGGAGTGGAGAGGGATATGGCTTTGAATATGTCTGAAACTAATGGGTTAACAATTCATAGAAAATTTCCCCTTATGGCTGTTGCATCTCCACATTTATAA 606 0.3614 MFGAGTDTTLAVLEWTMTELLRHPNVMQKLQNEIRNVVSQKTHITEQDLNNMHYLKAVIKETLRLHPPSPLLIPRESRQDTKIMGYDIAAGTQVIVNAFAISTDSSYWDQPLEFQPERFLKNVDIKGHDFQLIPFGAGRRGCPGISFAMVVNELVLANLVHQFDWSLPNGVERDMALNMSETNGLTIHRKFPLMAVASPHL 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme61726g00001 201 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 135 144 IPR017972 GO:0005506|GO:0016705
Trme61726g00001 201 PANTHER CYTOCHROME P450 71B11-RELATED 1 198 - -
Trme61726g00001 201 SUPERFAMILY Cytochrome P450 1 198 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme61726g00001 201 FunFam Predicted protein 2 195 - -
Trme61726g00001 201 Coils Coil 27 47 - -
Trme61726g00001 201 Pfam Cytochrome P450 1 180 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme61726g00001 201 PRINTS E-class P450 group I signature 97 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme61726g00001 201 PRINTS E-class P450 group I signature 13 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme61726g00001 201 PRINTS E-class P450 group I signature 56 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme61726g00001 201 PRINTS E-class P450 group I signature 142 165 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme61726g00001 201 PRINTS E-class P450 group I signature 132 142 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme61726g00001 201 Gene3D Cytochrome P450 1 192 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme61726g00001 201 PRINTS P450 superfamily signature 57 68 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme61726g00001 201 PRINTS P450 superfamily signature 133 142 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme61726g00001 201 PRINTS P450 superfamily signature 4 21 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme61726g00001 Trme-Chr61726 110 715 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme61726g00001 1 201 Cytochrome P450 AT3G48280 52.709 6.64e-75 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme61726g00001 - - gmx:100813357 329.331