Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme617090g00001 TTGGATGTTTACATCCATGATTACCTAGTGAAGAGGGATTTGAAGGCTTCAGCTCAGGCTTTTCAAGCTGAAGGGAAAGTGTCCTCTGATCCTGTTG 97 0.4433 MDVYIHDYLVKRDLKASAQAFQAEGKVSSDPV 32
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme617090g00001 32 ProSiteProfiles LIS1 homology (LisH) motif profile. 1 29 IPR006594 GO:0005515
Trme617090g00001 32 Pfam LisH 1 25 IPR006594 GO:0005515
Trme617090g00001 32 PANTHER TRANSCRIPTION ACTIVATOR MSS11 1 32 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR LUG Trme617090g00001 LisH 9.7e-08 CL0561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme617090g00001 - - han:110898480 65.4698