Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme61658g00001 TCAGGAGCAAAGGTTGTGACTATTGATGTACGAGAAGCCAAGAATCTCATCCAGACCGATCACATTTATCTTGATGTTAGGACGGTGGAAGAATTTGCGAAAGGGCATGTAGATGCAGCTAAGATCATTAACATTCCATACATGTTGGATACACCTAAGGGCAGGGTGAAGAACCCAGATTTTCTAAAGGAGATTTCATCTGTTTGCAATAAAGAAGATCATCTCGTCGTGTTGAGTCATATATCTGGAGACTCGGGGGGTCACCTTAGTGCTCCCAAATTCGTTAGTTAA 291 0.4227 SGAKVVTIDVREAKNLIQTDHIYLDVRTVEEFAKGHVDAAKIINIPYMLDTPKGRVKNPDFLKEISSVCNKEDHLVVLSHISGDSGGHLSAPKFVS 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme61658g00001 96 Pfam Rhodanese-like domain 11 85 IPR001763 -
Trme61658g00001 96 PANTHER THIOSULFATE SULFURTRANSFERASE 18 2 78 IPR044684 GO:0003824
Trme61658g00001 96 Gene3D - 1 91 IPR036873 -
Trme61658g00001 96 ProSiteProfiles Rhodanese domain profile. 17 91 IPR001763 -
Trme61658g00001 96 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 4 86 IPR036873 -
Trme61658g00001 96 CDD RHOD 12 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme61658g00001 Trme-Chr61658 279 838 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme61658g00001 4 77 Sulfurtransferasese or Rhodanese AT5G66170 58.108 8.46e-30 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme61658g00001 - K15692 aip:107642568 130.954