Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme616204g00001 AAGATATACAAGGATGCAGGGGCATCAGCAGGTGAGCTAGTGGTACTTGCACTAGCTCATGCATTTTCACTATTTGCTGCTATATCTTCTAGCATGCATGTATCTGGTGGCCATGTTAACCCTGCAGTTACTTTTGGTGCTCTTCTTGGTGGTAGAATCACTGCCCTTA 169 0.4497 KIYKDAGASAGELVVLALAHAFSLFAAISSSMHVSGGHVNPAVTFGALLGGRITAL 56
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme616204g00001 56 Pfam Major intrinsic protein 5 55 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme616204g00001 56 SUPERFAMILY Aquaporin-like 4 55 IPR023271 -
Trme616204g00001 56 PANTHER AQUAPORIN-8 8 55 IPR034294 -
Trme616204g00001 56 ProSitePatterns MIP family signature. 38 46 IPR022357 -
Trme616204g00001 56 Gene3D Glycerol uptake facilitator protein. 2 56 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme616204g00001 Trme-Chr616204 1 169 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme616204g00001 1 56 Major Intrinsic Protein MIP AT3G26520 58.929 1.19e-14 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme616204g00001 K09873 - qsa:O6P43_005415 88.1965