Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme6155g00001 ATGTTACTTAGTTTACGAGTGATGATTGTGAAAATTGAAACCTATGTGATGTTATTTATAGGGACAGAACCACCTTTCATAAGTGGTCTTCCAAGAAGTGGGGAATTCTCTAAGGCTCTTTACACAATTGATATTGGACAAAATGATCTTGCCTATGGTTCTCAGCACACTTCAGAGGACCAAGTTATAAGTTCAATTCCTGATATCTTGAGCCAATTCTCGCAAGCAGTTCAGCAACTATACAATGAAGGTGCAAGAGTGTTTTGGATTCACAATGCAAGACCAATTGGATGCTTGCCCTATGATTACATCTATTATCAACACAAGGAGGGTAACTTGGGTGCAAATGGTTGTGTTAAACCTCACAATGAGATTGCTCAGGAATTCAATAGGCAACTAAAGGACCAAGTTTTTCAGCCAAGAAGAAAGCCTCCATTAGCCAAATTTACATATGTTGATGTGTACACAGCCAAATATAAACTGCAAGGAGTTTAG 495 0.3838 MLLSLRVMIVKIETYVMLFIGTEPPFISGLPRSGEFSKALYTIDIGQNDLAYGSQHTSEDQVISSIPDILSQFSQAVQQLYNEGARVFWIHNARPIGCLPYDYIYYQHKEGNLGANGCVKPHNEIAQEFNRQLKDQVFQPRRKPPLAKFTYVDVYTAKYKLQGV 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme6155g00001 164 Gene3D SGNH hydrolase 17 163 IPR036514 -
Trme6155g00001 164 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 33 161 - -
Trme6155g00001 164 Pfam GDSL-like Lipase/Acylhydrolase 34 159 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme6155g00001 Trme-Chr6155 570 1404 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme6155g00001 37 155 Pollen Coat Proteome AT1G75930 28.226 5.81e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme6155g00001 - - gmx:100782272 230.335