Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme61556g00001 GATCTACCGAAAGAAGAGAAGGTGTTAGTGGTTGAAAGAGTCATTGAATCTTTGGGTCTTCAGGCAATAAGGGATTCTTTGGTTGGGACAGTGGAGCAACGAGGAATATCTGGAGGTCAAAGGAAGAGAGTAAACGTCGGACTAGAAATGGTTATGGAACCTTCCCTTCTAATTTTGGATGAACCTACATCTGGTTTGGACAGTTCATCTTCTCAATTACTGCTTAGAGCACTTAGACGCGAGGCTCTTGAAGGCGTAAACATATGTATGGTCCTTCACCAACCGAGCTACACATTGTTCAAGATGTTTGATGATTTTATACTGCTTGCTAAAGGAGGCCTTACAGTGTATCATGGACCTGTTAACAAAGTGGAAGAGTACTTCTCTGGGATGGGGATTGTAGTCCCTGACCGCGTAAACCCTCCAGATTACTACATTGACATTTTAGAAGGAATATTAAAACCAAGTGCAAGCTCAGGAGTGACCCATAAACAACTACCAGTTAGATGGATGCTTCATAATGGATATCCTGTGCCTATGGATATGCTGCAACTTATAGAAGGAATGTCAACTCCAAGTGGTA 583 0.4237 DLPKEEKVLVVERVIESLGLQAIRDSLVGTVEQRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEGVNICMVLHQPSYTLFKMFDDFILLAKGGLTVYHGPVNKVEEYFSGMGIVVPDRVNPPDYYIDILEGILKPSASSGVTHKQLPVRWMLHNGYPVPMDMLQLIEGMSTPSG 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme61556g00001 194 Gene3D - 1 131 IPR027417 -
Trme61556g00001 194 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 133 IPR027417 -
Trme61556g00001 194 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 2 152 - -
Trme61556g00001 194 Pfam ABC transporter 11 64 IPR003439 GO:0005524
Trme61556g00001 194 Pfam ABC-2 type transporter 93 190 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme61556g00001 Trme-Chr61556 1 874 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme61556g00001 25 117 Calmodulin-binding Proteins AT2G36910 32.110 5.94e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme61556g00001 - - lja:Lj3g3v3082280.1 338.576