Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme615288g00001 ATGGTGAGAGTAGCGGCACCGATAAGTGATAATATCTCCGATATACCAACGGATGGGTATCAGTGGAAGAAATATGGACAGAAATCAATAAAGAAATCACC 101 0.4059 MVRVAAPISDNISDIPTDGYQWKKYGQKSIKKSP 34
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme615288g00001 34 Gene3D WRKY domain 3 34 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trme615288g00001 34 ProSiteProfiles WRKY domain profile. 11 34 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trme615288g00001 34 Pfam WRKY DNA -binding domain 18 33 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trme615288g00001 34 SUPERFAMILY WRKY DNA-binding domain 14 34 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme615288g00001 2 34 WRKY Transcription Factor Family AT2G30590 60.606 7.00e-08 43.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trme615288g00001 WRKY 6.1e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme615288g00001 - - tpra:123894177 62.003