Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme614682g00001 ATGAAAGCAACCGGTGGATTCAGCCTTCAGAACAAACTTGGCGAAGGTGGATTTGGAACGGTTTATAAGGGTATTCTTGGAAACAACAAAGAAATAGCTGTGAAGAGAGTCTCGAAGAACTCGCGTCAAGGAAAGCAAGAATTTATAGCAGAAGTTACAACAATTGGAAGCCTTCACCACAAAAACTTAGTGAAACTCATTG 202 0.4059 MKATGGFSLQNKLGEGGFGTVYKGILGNNKEIAVKRVSKNSRQGKQEFIAEVTTIGSLHHKNLVKLI 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme614682g00001 67 SUPERFAMILY Protein kinase-like (PK-like) 2 67 IPR011009 -
Trme614682g00001 67 Pfam Protein kinase domain 8 67 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme614682g00001 67 ProSitePatterns Protein kinases ATP-binding region signature. 13 35 IPR017441 GO:0005524
Trme614682g00001 67 ProSiteProfiles Protein kinase domain profile. 7 67 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme614682g00001 67 Gene3D Phosphorylase Kinase; domain 1 1 67 - -
Trme614682g00001 67 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme614682g00001 Trme-Chr614682 9 210 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme614682g00001 3 67 Receptor kinase-like Gene Family AT4G23140 58.462 3.47e-22 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trme614682g00001 Pkinase 4.1e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme614682g00001 - - tpra:123883598 126.716