Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme61446g00001 GGATTCAATGGAACTTTAACTGAACCAGTTGAGAAAACTGGAGATCAGATTAAAGAAATGGAACTTAAAGTGCATCCAGAATTGAGACAACCCTTGACAGCACTTTGCAGTGATCCAAATACCACAGTAGTTGTTCTCAGTGGAAGTGGTAGAAAAGTCCTAGATGATAACTTCAAAGAATACGACATGTGGTTGGCAGCAGAGAATGGGATGTTTTTACAACCTTCAAAGGGTGAATGGATGACAACAATGCCAGAGCATCTGAATATGGAATGGGTCGACAGCGTGAAGAAAGAACACCGCGGTCACATTTTGATTTCGAGGAGAGGGAAACTTCACTTGTTTGGAATTACAAATATGCAGGTGCTTGCTTGA 375 0.4133 GFNGTLTEPVEKTGDQIKEMELKVHPELRQPLTALCSDPNTTVVVLSGSGRKVLDDNFKEYDMWLAAENGMFLQPSKGEWMTTMPEHLNMEWVDSVKKEHRGHILISRRGKLHLFGITNMQVLA 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme61446g00001 124 Pfam Trehalose-phosphatase 18 98 IPR003337 GO:0003824|GO:0005992
Trme61446g00001 124 FunFam Alpha,alpha-trehalose-phosphate synthase 20 96 - -
Trme61446g00001 124 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 98 IPR001830 GO:0003824|GO:0005992
Trme61446g00001 124 SUPERFAMILY HAD-like 2 98 IPR036412 -
Trme61446g00001 124 Gene3D - 1 112 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme61446g00001 Trme-Chr61446 314 871 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme61446g00001 1 97 Trehalose Biosynthesis Gene Families AT1G78580 77.000 7.25e-49 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme61446g00001 K16055 - vum:124848969 198.749