Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme61413g00001 GACGCTCCTTGGATATTAACTGTTGGTGCCACCACCATTGACCGCAGCCTTCAATCCAACATCTTCTTGGGTAATAACAAAGTTGTCGAGGGTCAAGGTATAAATTTATCTCCTCTTTCAAAATCTGTTGATTATCCATTGATAACCGGAGAGTCCGCCAAAGCAGCTAAGGCTGACTCAGCAGAAGCAAGACAGTGTCATCCAAATTCATTGGATAAGAAAAAAGTCAATGGAAGCATTGTCATTTGCGATGGCATAAATGATGTTGATTATTCAACCNNNNNNNNNNANNNTGTTGTACAAGATTTGGGTGGATTAGGTCTTGTTCATATTACTAACAATGAAGGAGCAGTGGCAAGTAGTTATGGAGATTTCCCAGCAACTGTCATACGATCGAAAGATGCTTCCACAATCCTCCAATATGTCAATTCAACCAGGTAA 441 0.3946 DAPWILTVGATTIDRSLQSNIFLGNNKVVEGQGINLSPLSKSVDYPLITGESAKAAKADSAEARQCHPNSLDKKKVNGSIVICDGINDVDYSTXXXXXVVQDLGGLGLVHITNNEGAVASSYGDFPATVIRSKDASTILQYVNSTR 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme61413g00001 146 CDD PA_subtilisin_like 23 146 - -
Trme61413g00001 146 Gene3D - 14 146 - -
Trme61413g00001 146 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 144 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme61413g00001 Trme-Chr61413 1 668 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme61413g00001 2 146 Subtilisin-like Serine Gene Family AT1G20160 48.966 7.40e-41 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme61413g00001 K25898 - gmx:100820194 176.792