Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme61399g00001 AGACAACAAACATCATCACATCCATATTATGCAGCACTTGGTTTTCATGGAATGTTTCAAACACCATTAGAGGTAGTAGAATCAAAGGCAAACACAAACCATGTTGATGTTTGTAGTTCTCAAATGCCTCAAAATTGGGTGTCTCCAAGAGATTATTCTTCTTCTGCTTCTCAGACTTTGGAGCAACAAATGAACAATGGTGTAGCTGGTGCTGCTGCTGCTGCTGNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNCTTTCAATGAGTCCTGGTTCTCAATCTAGTTGTGTTACTGCTCCTAGTCAGATCTCACCTACTGGAACAGAATCAGTGACTATGTCTATGGATGCTAAAAAGAGAGGAGCTGCTAAGCTTGGACAGAAGCAACCTGTGCATAGGAAATCTATTGACACTTTTGGACAAAGAACTTCACAGTATAGAGGTGTCACAAGGTAA 489 0.3579 RQQTSSHPYYAALGFHGMFQTPLEVVESKANTNHVDVCSSQMPQNWVSPRDYSSSASQTLEQQMNNGVAGAAAAAXXXXXXXXXXXXXXXXXXXXXLSMSPGSQSSCVTAPSQISPTGTESVTMSMDAKKRGAAKLGQKQPVHRKSIDTFGQRTSQYRGVTR 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme61399g00001 162 MobiDBLite consensus disorder prediction 93 162 - -
Trme61399g00001 162 MobiDBLite consensus disorder prediction 98 124 - -
Trme61399g00001 162 MobiDBLite consensus disorder prediction 145 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme61399g00001 Trme-Chr61399 1 489 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme61399g00001 97 162 AP2-EREBP Transcription Factor Family AT4G37750 49.451 2.71e-17 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme61399g00001 K09285 - qsa:O6P43_015953 148.288