Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme61383g00001 ATGTATCCCACTTACAATATCTTCATTGGCAGTGGTGATCATATTCAGAATTTTGGAATGAGAGTCAGCACGACCATGACAACCATTCTAGGACGTGTAATTGGCCCCCCAGAATTGAAGTTGGGTGATCGAAATGGCAAGAATATCAAGATAACAGTGGATCTAGATAAATGTCATTGGAACCTTGCTGGAAGATCAATGGTGGAAGGCAAACCAGTTGAGCATTGGGCAATTCTTGATTTCACCAGTGTTGGGCCGTATAATAAGAAATTAAGACGAAAGGAATTCGTTGAAAAACTTATTGCTAAATACAAAAAGTTGGGTATCTTTATGCAAGAGCCCATTTGGTATGAAGAATCTTCAATGAAGATACTTTCAAGTCATGACTTGCTATCTGAATTACTTGAAAAAATCAACAACATTTGTAAATATAGCCAAGGTGGTCTACAATTTCTTCTGTGTGTGATGGCTTATAAAAATCCAGGTTACAAATACCTCAAGTGGATTTCTGAGACCAAAGTTGGTATAGTGACTCAATGTTGTTTGTCTCCTAGTGCTAATCAAGGGGATGAAAAATTCTATACTTATCTGTCTCTCAAGATCAATGCCAAGCTTGGAGGCAGTAATGTAGAGCTCAATAATAGGCTCCCTCACTTTGAGGGTGACGAACATGTTATGTTTATAGGGGCTGATGTCAATCACCCTGGTTTTCGTGACAATAAGAGTCCATCAATTGTTGCTGTGGTTGCAACCGTTAATTGGCCCGCTGCAAATCGTTATGCAGCACGTGTTTGCCCGCAATTCAATCGAA 811 0.3946 MYPTYNIFIGSGDHIQNFGMRVSTTMTTILGRVIGPPELKLGDRNGKNIKITVDLDKCHWNLAGRSMVEGKPVEHWAILDFTSVGPYNKKLRRKEFVEKLIAKYKKLGIFMQEPIWYEESSMKILSSHDLLSELLEKINNICKYSQGGLQFLLCVMAYKNPGYKYLKWISETKVGIVTQCCLSPSANQGDEKFYTYLSLKINAKLGGSNVELNNRLPHFEGDEHVMFIGADVNHPGFRDNKSPSIVAVVATVNWPAANRYAARVCPQFNR 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme61383g00001 270 Gene3D - 220 270 IPR036397 GO:0003676
Trme61383g00001 270 Pfam Piwi domain 152 267 IPR003165 GO:0003676
Trme61383g00001 270 ProSiteProfiles Piwi domain profile. 151 270 IPR003165 GO:0003676
Trme61383g00001 270 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 14 267 - -
Trme61383g00001 270 Gene3D - 33 214 - -
Trme61383g00001 270 SUPERFAMILY Ribonuclease H-like 31 269 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme61383g00001 Trme-Chr61383 32 842 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme61383g00001 13 270 Eukaryotic Initiation Factors Gene Family AT1G48410 31.985 6.38e-31 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme61383g00001 K11593 - gmx:100783571 423.705